Can HumDay connect to Warwick Enterobase?

Yes. HumDay reads Warwick Enterobase's own published API description and derives the operations from it, so there is no hand-built connector to wait for. 26 operations are documented.

Do I need to write code to automate Warwick Enterobase?

No. You describe the outcome you want in plain words. HumDay agrees a contract with you, writes the program, and shows you a test run before anything touches your Warwick Enterobase account.

What can HumDay do in Warwick Enterobase?

9 of the 26 documented operations change something in Warwick Enterobase, and 17 read from it. HumDay only ever uses the specific operations your approved contract needs.

Is my Warwick Enterobase account safe?

Your credentials are stored encrypted and are never shown in chat, code, or logs. Every run is limited to the operations you explicitly approved, and anything that writes to Warwick Enterobase is held behind that approval.

Automate Warwick Enterobase

HumDay reads Warwick Enterobase’s own published API description and derives 26 operations from it. Describe the outcome you want in plain words — you get a program that is written, proven on real data, and run for you.

What Warwick Enterobase is

API for EnteroBase (https://enterobase.warwick.ac.uk) EnteroBase is a user-friendly online resource, where users can upload their own sequencing data for de novo assembly by a stream-lined pipeline. The assemblies are used for calling MLST and wgMLST patterns, allowing users to compare their strains to publically available genotyping data from other EnteroBase users, GenBank and classical MLST dat

What HumDay can do in Warwick Enterobase

9 documented operations change something in Warwick Enterobase.

POSTGeneric endpoint for lookup of barcodes/api/v2.0/lookup/{barcode}
POSTTraces (sequence-reads) metadata/api/v2.0/{database}/traces/{barcode}
PUTTraces (sequence-reads) metadata/api/v2.0/{database}/traces/{barcode}
POSTGenotyping schemes/api/v2.0/{database}/schemes/{barcode}
PUTGenotyping schemes/api/v2.0/{database}/schemes/{barcode}
POSTStrain metadata/api/v2.0/{database}/strains/{barcode}
PUTStrain metadata/api/v2.0/{database}/strains/{barcode}
POSTGenome assemblies/api/v2.0/{database}/assemblies/{barcode}
PUTGenome assemblies/api/v2.0/{database}/assemblies/{barcode}

What HumDay can read from Warwick Enterobase

These are the operations a schedule or a trigger can watch.

GETGeneric endpoint for lookup list of barcodes/api/v2.0/lookup
GETTop level information about EnteroBase databases/api/v2.0
GETLogin endpoint, refresh your API token/api/v2.0/login
GETGeneric endpoint for lookup of barcodes/api/v2.0/lookup/{barcode}
GETTraces (sequence-reads) metadata/api/v2.0/{database}/traces
GETGenotyping schemes/api/v2.0/{database}/schemes
GETStrain metadata/api/v2.0/{database}/strains
GETGenome assemblies/api/v2.0/{database}/assemblies
GETStrain data/api/v2.0/{database}/straindata
GETStrain previous metadata/api/v2.0/{database}/strainsversion
GETST profile data/api/v2.0/{database}/{scheme}/sts
GETLoci/api/v2.0/{database}/{scheme}/loci
GETAlleles data/api/v2.0/{database}/{scheme}/alleles
GETTraces (sequence-reads) metadata/api/v2.0/{database}/traces/{barcode}
GETGenotyping schemes/api/v2.0/{database}/schemes/{barcode}
GETStrain metadata/api/v2.0/{database}/strains/{barcode}
GETGenome assemblies/api/v2.0/{database}/assemblies/{barcode}

How automating Warwick Enterobase works

Describe the outcome. Say what you want to happen, in your own words. No node graphs, no field mapping.
Approve the contract. HumDay writes down exactly what it will do, what it will touch, and what it will never do. You approve it before anything is built.
See it proven. The program runs and shows you the result before it is allowed near your live Warwick Enterobase account.
Grant access, then go live. You approve the specific Warwick Enterobase operations it may use — and only those.